IL_4V7C_106

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GGG*UUAC

Length

7 nucleotides

Bulged bases

4V7C|1|BA|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7C_106 not in the Motif Atlas

Geometric match to IL_3TD0_005

Geometric discrepancy: 0.3273

The information below is about IL_3TD0_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

4V7C|1|BA|G|880
4V7C|1|BA|G|881
4V7C|1|BA|G|882
*
4V7C|1|BA|U|894
4V7C|1|BA|U|895
4V7C|1|BA|A|896
4V7C|1|BA|C|897

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AV

Transfer RNA; tRNA