IL_4V7C_148

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GUG*UAAAC

Length

8 nucleotides

Bulged bases

4V7C|1|BA|A|1900

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7C_148 not in the Motif Atlas

Geometric match to IL_6CK5_011

Geometric discrepancy: 0.3479

The information below is about IL_6CK5_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_60572.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

4

Unit IDs

4V7C|1|BA|G|1840
4V7C|1|BA|U|1841
4V7C|1|BA|G|1842
*
4V7C|1|BA|U|1898
4V7C|1|BA|A|1899
4V7C|1|BA|A|1900
4V7C|1|BA|A|1901
4V7C|1|BA|C|1902

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BD

50S ribosomal protein L2