IL_4V7C_256

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7C_256 not in the Motif Atlas

Homologous match to IL_5J7L_023

Geometric discrepancy: 0.1855

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

4V7C|1|AA|G|450
4V7C|1|AA|A|451
4V7C|1|AA|A|452
4V7C|1|AA|G|453
4V7C|1|AA|G|454
4V7C|1|AA|G|455
*
4V7C|1|AA|C|477
4V7C|1|AA|A|478
4V7C|1|AA|U|479
4V7C|1|AA|U|480
4V7C|1|AA|G|481
4V7C|1|AA|A|482
4V7C|1|AA|C|483

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16