IL_4V7D_099

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GAC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GAC,GUC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7D_099 not in the Motif Atlas

Geometric match to IL_3LA5_001

Geometric discrepancy: 0.1794

The information below is about IL_3LA5_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4V7D|1|AA|G|2246
4V7D|1|AA|A|2247
4V7D|1|AA|C|2248
*
4V7D|1|AA|G|2256
4V7D|1|AA|U|2257
4V7D|1|AA|C|2258

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AP

50S ribosomal protein L16

Chain AZ

50S ribosomal protein L27