IL_4V7I_073

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

CC*GCG

Length

5 nucleotides

Bulged bases

4V7I|1|A8|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7I_073 not in the Motif Atlas

Geometric match to IL_1DQF_001

Geometric discrepancy: 0.3601

The information below is about IL_1DQF_001

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.15

Basepair signature

cWW-L-cWW

Number of instances in this motif group

41

Unit IDs

4V7I|1|A8|C|1727
4V7I|1|A8|C|1728
*
4V7I|1|A8|G|1731
4V7I|1|A8|C|1732
4V7I|1|A8|G|1733

Current chains

Chain A8

23S ribosomal RNA

Nearby chains