IL_4V7I_132

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

GGGAC*GCC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7I_132 not in the Motif Atlas

Geometric match to IL_2OEU_001

Geometric discrepancy: 0.3631

The information below is about IL_2OEU_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46387.1

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

4V7I|1|BA|G|202
4V7I|1|BA|G|203
4V7I|1|BA|G|204
4V7I|1|BA|A|205
4V7I|1|BA|C|206
*
4V7I|1|BA|G|213
4V7I|1|BA|C|214
4V7I|1|BA|C|215

Current chains

Chain BA

16S ribosomal RNA

Nearby chains