IL_4V7I_141

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7I_141 not in the Motif Atlas

Homologous match to IL_4LFB_019

Geometric discrepancy: 0.4828

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

4V7I|1|BA|G|450
4V7I|1|BA|A|451
4V7I|1|BA|A|452
4V7I|1|BA|G|453
4V7I|1|BA|G|454
4V7I|1|BA|G|455
*
4V7I|1|BA|C|477
4V7I|1|BA|A|478
4V7I|1|BA|U|479
4V7I|1|BA|U|480
4V7I|1|BA|G|481
4V7I|1|BA|A|482
4V7I|1|BA|C|483

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BP

30S ribosomal protein S16