IL_4V7M_332
3D structure
- PDB id
- 4V7M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of Capreomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- CUC*GAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CUC,GAG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7M_332 not in the Motif Atlas
- Geometric match to IL_3R1D_002
- Geometric discrepancy: 0.2188
- The information below is about IL_3R1D_002
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10892.1
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 39
Unit IDs
4V7M|1|DA|C|2261
4V7M|1|DA|U|2262
4V7M|1|DA|C|2263
*
4V7M|1|DA|G|2277
4V7M|1|DA|A|2278
4V7M|1|DA|G|2279
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain CX
- Transfer RNA; tRNA
- Chain D0
- 50S ribosomal protein L27
- Chain DQ
- 50S ribosomal protein L16
Coloring options: