IL_4V7R_144
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GCGAAUG*CAAAC
- Length
- 12 nucleotides
- Bulged bases
- 4V7R|1|B1|G|1001
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_144 not in the Motif Atlas
- Geometric match to IL_4V9F_035
- Geometric discrepancy: 0.2398
- The information below is about IL_4V9F_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38603.1
- Basepair signature
- cWW-cWS-L-R-L-R-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V7R|1|B1|G|999
4V7R|1|B1|C|1000
4V7R|1|B1|G|1001
4V7R|1|B1|A|1002
4V7R|1|B1|A|1003
4V7R|1|B1|U|1004
4V7R|1|B1|G|1005
*
4V7R|1|B1|C|1045
4V7R|1|B1|A|1046
4V7R|1|B1|A|1047
4V7R|1|B1|A|1048
4V7R|1|B1|C|1049
Current chains
- Chain B1
- 25S ribosomal RNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain BE
- 60S ribosomal protein L5
- Chain BJ
- 60S ribosomal protein L10
Coloring options: