IL_4V7R_246
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CG*UUUG
- Length
- 6 nucleotides
- Bulged bases
- 4V7R|1|B1|U|3382
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_246 not in the Motif Atlas
- Geometric match to IL_7A0S_054
- Geometric discrepancy: 0.3498
- The information below is about IL_7A0S_054
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
4V7R|1|B1|C|3324
4V7R|1|B1|G|3325
*
4V7R|1|B1|U|3380
4V7R|1|B1|U|3381
4V7R|1|B1|U|3382
4V7R|1|B1|G|3383
Current chains
- Chain B1
- 25S ribosomal RNA
Nearby chains
- Chain BC
- 60S ribosomal protein L3
- Chain Ba
- 60S ribosomal protein L31-A
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