IL_4V7R_388
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 4V7R|1|D1|G|908, 4V7R|1|D1|A|920, 4V7R|1|D1|A|921, 4V7R|1|D1|U|922
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_388 not in the Motif Atlas
- Homologous match to IL_8C3A_036
- Geometric discrepancy: 0.1514
- The information below is about IL_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V7R|1|D1|G|907
4V7R|1|D1|G|908
4V7R|1|D1|G|909
*
4V7R|1|D1|U|919
4V7R|1|D1|A|920
4V7R|1|D1|A|921
4V7R|1|D1|U|922
4V7R|1|D1|C|923
Current chains
- Chain D1
- 25S ribosomal RNA
Nearby chains
- Chain DB
- 60S ribosomal protein L2
- Chain DO
- 60S ribosomal protein L15-A
- Chain DQ
- 60S ribosomal protein L17-A
- Chain Dd
- 60S ribosomal protein L37-A
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