IL_4V7R_418
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GGUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_418 not in the Motif Atlas
- Geometric match to IL_7RQB_050
- Geometric discrepancy: 0.2489
- The information below is about IL_7RQB_050
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_50694.2
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 27
Unit IDs
4V7R|1|D1|G|1492
4V7R|1|D1|G|1493
4V7R|1|D1|U|1494
4V7R|1|D1|U|1495
*
4V7R|1|D1|A|1835
4V7R|1|D1|C|1836
Current chains
- Chain D1
- 25S ribosomal RNA
Nearby chains
- Chain DW
- 60S ribosomal protein L25
- Chain Dd
- 60S ribosomal protein L37-A
- Chain De
- 60S ribosomal protein L39
Coloring options: