IL_4V7R_429

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UUAAC*GGAAGA

Length

11 nucleotides

Bulged bases

4V7R|1|D1|A|1750

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7R_429 not in the Motif Atlas

Homologous match to IL_8C3A_077

Geometric discrepancy: 0.2809

The information below is about IL_8C3A_077

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69313.1

Basepair signature

cWW-tWH-tHH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

4V7R|1|D1|U|1694
4V7R|1|D1|U|1695
4V7R|1|D1|A|1696
4V7R|1|D1|A|1697
4V7R|1|D1|C|1698
*
4V7R|1|D1|G|1747
4V7R|1|D1|G|1748
4V7R|1|D1|A|1749
4V7R|1|D1|A|1750
4V7R|1|D1|G|1751
4V7R|1|D1|A|1752

Current chains

Chain D1

25S ribosomal RNA

Nearby chains