IL_4V7R_446
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- UCAAAGU*AACCAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_446 not in the Motif Atlas
- Homologous match to IL_5TBW_088
- Geometric discrepancy: 0.2014
- The information below is about IL_5TBW_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V7R|1|D1|U|2211
4V7R|1|D1|C|2212
4V7R|1|D1|A|2213
4V7R|1|D1|A|2214
4V7R|1|D1|A|2215
4V7R|1|D1|G|2216
4V7R|1|D1|U|2217
*
4V7R|1|D1|A|2228
4V7R|1|D1|A|2229
4V7R|1|D1|C|2230
4V7R|1|D1|C|2231
4V7R|1|D1|A|2232
4V7R|1|D1|A|2233
4V7R|1|D1|G|2234
Current chains
- Chain D1
- 25S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: