IL_4V7R_473
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CAU*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_473 not in the Motif Atlas
- Geometric match to IL_2O3X_001
- Geometric discrepancy: 0.2206
- The information below is about IL_2O3X_001
- Detailed Annotation
- Stack and bulge
- Broad Annotation
- Stack and bulge
- Motif group
- IL_61702.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V7R|1|D1|C|2889
4V7R|1|D1|A|2890
4V7R|1|D1|U|2891
*
4V7R|1|D1|G|2912
4V7R|1|D1|C|2913
4V7R|1|D1|G|2914
Current chains
- Chain D1
- 25S ribosomal RNA
Nearby chains
- Chain DC
- 60S ribosomal protein L3
- Chain DU
- 60S ribosomal protein L23
Coloring options: