IL_4V7R_503
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- AGUG*CAU
- Length
- 7 nucleotides
- Bulged bases
- 4V7R|1|D2|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_503 not in the Motif Atlas
- Homologous match to IL_5TBW_378
- Geometric discrepancy: 0.1668
- The information below is about IL_5TBW_378
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4V7R|1|D2|A|84
4V7R|1|D2|G|85
4V7R|1|D2|U|86
4V7R|1|D2|G|87
*
4V7R|1|D2|C|94
4V7R|1|D2|A|95
4V7R|1|D2|U|96
Current chains
- Chain D2
- 5S ribosomal RNA
Nearby chains
- Chain D1
- Large subunit ribosomal RNA; LSU rRNA
- Chain DF
- 60S ribosomal protein L6-A
- Chain DG
- 60S ribosomal protein L7-A
- Chain DJ
- 60S ribosomal protein L10
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