IL_4V7S_213

3D structure

PDB id

4V7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to telithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

UA*UUG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7S_213 not in the Motif Atlas

Geometric match to IL_5VSU_003

Geometric discrepancy: 0.3671

The information below is about IL_5VSU_003

Detailed Annotation

Single stack bend

Broad Annotation

Single stack bend

Motif group

IL_26793.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

16

Unit IDs

4V7S|1|CA|U|458
4V7S|1|CA|A|459
*
4V7S|1|CA|U|472
4V7S|1|CA|U|473
4V7S|1|CA|G|474

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CP

30S ribosomal protein S16