IL_4V7W_293
3D structure
- PDB id
- 4V7W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGGA*UCCC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: GGGA,UCCC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7W_293 not in the Motif Atlas
- Geometric match to IL_5EW4_002
- Geometric discrepancy: 0.3097
- The information below is about IL_5EW4_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
4V7W|1|DA|G|1482
4V7W|1|DA|G|1484
4V7W|1|DA|G|1485
4V7W|1|DA|A|1486
*
4V7W|1|DA|U|1503
4V7W|1|DA|C|1504
4V7W|1|DA|C|1505
4V7W|1|DA|C|1506
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain DD
- 50S ribosomal protein L2
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