IL_4V8E_201
3D structure
- PDB id
- 4V8E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UUAAG*CGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8E_201 not in the Motif Atlas
- Homologous match to IL_4WF9_019
- Geometric discrepancy: 0.1066
- The information below is about IL_4WF9_019
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V8E|1|CA|U|630
4V8E|1|CA|U|631
4V8E|1|CA|A|632
4V8E|1|CA|A|633
4V8E|1|CA|G|634
*
4V8E|1|CA|C|644
4V8E|1|CA|G|645
4V8E|1|CA|G|646
4V8E|1|CA|A|647
4V8E|1|CA|G|648
Current chains
- Chain CA
- RNA (2912-MER)
Nearby chains
- Chain CF
- 50S ribosomal protein L4
- Chain CO
- 50S ribosomal protein L15
Coloring options: