IL_4V8E_369
3D structure
- PDB id
- 4V8E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGGGAG*CAG
- Length
- 9 nucleotides
- Bulged bases
- 4V8E|1|DA|G|1443
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8E_369 not in the Motif Atlas
- Homologous match to IL_4LFB_064
- Geometric discrepancy: 0.3308
- The information below is about IL_4LFB_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49061.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
4V8E|1|DA|C|1440
4V8E|1|DA|G|1441
4V8E|1|DA|G|1442
4V8E|1|DA|G|1443
4V8E|1|DA|A|1446
4V8E|1|DA|G|1447
*
4V8E|1|DA|C|1459
4V8E|1|DA|A|1460
4V8E|1|DA|G|1461
Current chains
- Chain DA
- 16S ribosomal RNA
Nearby chains
- Chain CA
- Large subunit ribosomal RNA; LSU rRNA
- Chain CR
- 50S ribosomal protein L19
- Chain DW
- 30S RIBOSOMAL PROTEIN S20
Coloring options: