IL_4V8G_367
3D structure
- PDB id
- 4V8G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of RMF bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGG*UCAGCA
- Length
- 9 nucleotides
- Bulged bases
- 4V8G|1|AA|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8G_367 not in the Motif Atlas
- Geometric match to IL_4V88_451
- Geometric discrepancy: 0.3407
- The information below is about IL_4V88_451
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_97255.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
4V8G|1|AA|U|1056
4V8G|1|AA|G|1057
4V8G|1|AA|G|1058
*
4V8G|1|AA|U|1199
4V8G|1|AA|C|1200
4V8G|1|AA|A|1201
4V8G|1|AA|G|1202
4V8G|1|AA|C|1203
4V8G|1|AA|A|1204
Current chains
- Chain AA
- 16S Ribosomal RNA
Nearby chains
- Chain AC
- 30S Ribosomal Protein S3
- Chain AJ
- 30S Ribosomal Protein S10
- Chain AN
- 30S Ribosomal Protein S14
Coloring options: