IL_4V8J_022

3D structure

PDB id

4V8J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G347U.

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

4V8J|1|AA|A|555

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8J_022 not in the Motif Atlas

Homologous match to IL_4LFB_022

Geometric discrepancy: 0.0975

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.6

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

4

Unit IDs

4V8J|1|AA|C|552
4V8J|1|AA|G|553
4V8J|1|AA|U|554
4V8J|1|AA|A|555
4V8J|1|AA|A|556
4V8J|1|AA|A|557
4V8J|1|AA|G|558
*
4V8J|1|AA|C|857
4V8J|1|AA|G|858

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AQ

30S ribosomal protein S17