IL_4V8J_044
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GG*UCAGC
- Length
- 7 nucleotides
- Bulged bases
- 4V8J|1|AA|C|1181, 4V8J|1|AA|A|1182
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8J_044 not in the Motif Atlas
- Homologous match to IL_4LFB_045
- Geometric discrepancy: 0.1175
- The information below is about IL_4LFB_045
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
4V8J|1|AA|G|1039
4V8J|1|AA|G|1040
*
4V8J|1|AA|U|1180
4V8J|1|AA|C|1181
4V8J|1|AA|A|1182
4V8J|1|AA|G|1183
4V8J|1|AA|C|1184
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AC
- 30S ribosomal protein S3
- Chain AJ
- 30S ribosomal protein S10
- Chain AN
- 30S ribosomal protein S14
- Chain AY
- Transfer RNA; tRNA
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