IL_4V8J_048
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- UACAAAG*CAAAAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8J_048 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.1122
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V8J|1|AA|U|1228
4V8J|1|AA|A|1229
4V8J|1|AA|C|1230
4V8J|1|AA|A|1231
4V8J|1|AA|A|1232
4V8J|1|AA|A|1233
4V8J|1|AA|G|1234
*
4V8J|1|AA|C|1265
4V8J|1|AA|A|1266
4V8J|1|AA|A|1267
4V8J|1|AA|A|1268
4V8J|1|AA|A|1269
4V8J|1|AA|A|1270
4V8J|1|AA|G|1271
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AG
- 30S ribosomal protein S7
- Chain AI
- 30S ribosomal protein S9
- Chain AJ
- 30S ribosomal protein S10
- Chain AN
- 30S ribosomal protein S14
- Chain AU
- 30S ribosomal protein THX
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