IL_4V8J_220
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 4V8J|1|CA|C|1036
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8J_220 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.0981
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.5
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V8J|1|CA|U|1034
4V8J|1|CA|G|1035
4V8J|1|CA|C|1036
4V8J|1|CA|A|1037
4V8J|1|CA|U|1038
*
4V8J|1|CA|A|1185
4V8J|1|CA|U|1186
4V8J|1|CA|G|1187
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CC
- 30S ribosomal protein S3
- Chain CJ
- 30S ribosomal protein S10
- Chain CN
- 30S ribosomal protein S14
- Chain CX
- messenger RNA
- Chain CY
- Transfer RNA; tRNA
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