IL_4V8J_226
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- UACAAAG*CAAAAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8J_226 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.1055
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V8J|1|CA|U|1228
4V8J|1|CA|A|1229
4V8J|1|CA|C|1230
4V8J|1|CA|A|1231
4V8J|1|CA|A|1232
4V8J|1|CA|A|1233
4V8J|1|CA|G|1234
*
4V8J|1|CA|C|1265
4V8J|1|CA|A|1266
4V8J|1|CA|A|1267
4V8J|1|CA|A|1268
4V8J|1|CA|A|1269
4V8J|1|CA|A|1270
4V8J|1|CA|G|1271
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CG
- 30S ribosomal protein S7
- Chain CI
- 30S ribosomal protein S9
- Chain CJ
- 30S ribosomal protein S10
- Chain CN
- 30S ribosomal protein S14
- Chain CU
- 30S ribosomal protein THX
Coloring options: