IL_4V8J_239
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- CGGGAG*CAG
- Length
- 9 nucleotides
- Bulged bases
- 4V8J|1|CA|G|1424, 4V8J|1|CA|G|1425, 4V8J|1|CA|A|1426
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8J_239 not in the Motif Atlas
- Homologous match to IL_4LFB_064
- Geometric discrepancy: 0.4366
- The information below is about IL_4LFB_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49061.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
4V8J|1|CA|C|1422
4V8J|1|CA|G|1423
4V8J|1|CA|G|1424
4V8J|1|CA|G|1425
4V8J|1|CA|A|1426
4V8J|1|CA|G|1427
*
4V8J|1|CA|C|1436
4V8J|1|CA|A|1437
4V8J|1|CA|G|1438
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CT
- 30S ribosomal protein S20
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DT
- 50S ribosomal protein L19
Coloring options: