IL_4V8J_325
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- CUG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8J_325 not in the Motif Atlas
- Geometric match to IL_4PCJ_001
- Geometric discrepancy: 0.1841
- The information below is about IL_4PCJ_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
4V8J|1|DA|C|2108
4V8J|1|DA|U|2109
4V8J|1|DA|G|2110
*
4V8J|1|DA|C|2179
4V8J|1|DA|U|2180
4V8J|1|DA|G|2181
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain CW
- Transfer RNA; tRNA
- Chain DC
- 50S ribosomal protein L1
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