IL_4V8J_364

3D structure

PDB id

4V8J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G347U.

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CAG*UGGG

Length

7 nucleotides

Bulged bases

4V8J|1|BA|G|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8J_364 not in the Motif Atlas

Homologous match to IL_9DFE_010

Geometric discrepancy: 0.2403

The information below is about IL_9DFE_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85599.2

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

9

Unit IDs

4V8J|1|BA|C|288
4V8J|1|BA|A|289
4V8J|1|BA|G|290
*
4V8J|1|BA|U|350
4V8J|1|BA|G|351
4V8J|1|BA|G|352
4V8J|1|BA|G|353

Current chains

Chain BA

23S rRNA

Nearby chains