IL_4V8P_182
3D structure
- PDB id
- 4V8P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophila 60S ribosomal subunit in complex with initiation factor 6.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.52 Å
Loop
- Sequence
- GGAGUCAC*GAAAAC
- Length
- 14 nucleotides
- Bulged bases
- 4V8P|1|D1|A|564, 4V8P|1|D1|G|565
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37794.1
- Basepair signature
- cWW-cWW-L-R-R-L-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V8P|1|D1|G|562
4V8P|1|D1|G|563
4V8P|1|D1|A|564
4V8P|1|D1|G|565
4V8P|1|D1|U|566
4V8P|1|D1|C|567
4V8P|1|D1|A|568
4V8P|1|D1|C|569
*
4V8P|1|D1|G|600
4V8P|1|D1|A|601
4V8P|1|D1|A|602
4V8P|1|D1|A|603
4V8P|1|D1|A|604
4V8P|1|D1|C|605
Current chains
- Chain D1
- 26S RRNA
Nearby chains
- Chain CC
- RPL4
- Chain CV
- 60S RIBOSOMAL PROTEIN L7
- Chain DF
- RPL14
- Chain DX
- RPL18A
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