Motif IL_37794.1 Version IL_37794.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-10 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4WF9_067 | 4WF9 | 0.6704 | 0 | X | LSU rRNA | U | 1756 | U | 1757 | A | 1758 | G | 1759 | G | 1760 | G | 1761 | * | C | 1768 | C | 1769 | C | 1770 | A | 1771 | G | 1772 | A | 1773 | ncWW | ncWW | cWW | |||
| 2 | IL_4V8P_182 | 4V8P | 0.0000 | 2 | D1 | LSU rRNA | G | 600 | A | 601 | A | 602 | A | 603 | A | 604 | C | 605 | * | G | 562 | G | 563 | U | 566 | C | 567 | A | 568 | C | 569 | cWW | ncwW | ncWB | cWW | cWW | |
| 3 | IL_4V88_421 | 4V88 | 0.7857 | 0 | Triple sheared related | A6 | SSU rRNA | G | 730 | C | 731 | G | 732 | A | 733 | A | 734 | C | 735 | * | G | 703 | C | 704 | U | 705 | A | 706 | A | 707 | C | 708 | cWW | cWW | ntSH | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAGGG*CCCAGA | 1 |
| GAAAAC*GGAGUCAC | 1 |
| GCGAAC*GCUAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAGG*CCAG | 1 |
| AAAA*GAGUCA | 1 |
| CGAA*CUAA | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Triple sheared related (1)
- Basepair signature
- cWW-cWW-L-R-R-L-cWW-cWW
- Heat map statistics
- Min 0.67 | Avg 0.54 | Max 0.97
Coloring options: