IL_4V8P_225
3D structure
- PDB id
- 4V8P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophila 60S ribosomal subunit in complex with initiation factor 6.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.52 Å
Loop
- Sequence
- CUAAG*CAAAAG
- Length
- 11 nucleotides
- Bulged bases
- 4V8P|1|D1|A|1613, 4V8P|1|D1|A|1614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_53523.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 23
Unit IDs
4V8P|1|D1|C|1558
4V8P|1|D1|U|1559
4V8P|1|D1|A|1560
4V8P|1|D1|A|1561
4V8P|1|D1|G|1562
*
4V8P|1|D1|C|1610
4V8P|1|D1|A|1611
4V8P|1|D1|A|1612
4V8P|1|D1|A|1613
4V8P|1|D1|A|1614
4V8P|1|D1|G|1615
Current chains
- Chain D1
- 26S RRNA
Nearby chains
- Chain C2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain CA
- RPL8
- Chain DA
- RIBOSOMAL PROTEIN L37
- Chain DB
- RPL39
- Chain DL
- RPL34
Coloring options: