3D structure

PDB id
4V91 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GGAUAAAUC*GGAAUAC
Length
16 nucleotides
Bulged bases
4V91|1|1|A|519, 4V91|1|1|U|520
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_17748.1
Basepair signature
cWW-cWW-tHW-tWH-tHW-tHW-bif-cWW
Number of instances in this motif group
2

Unit IDs

4V91|1|1|G|517
4V91|1|1|G|518
4V91|1|1|A|519
4V91|1|1|U|520
4V91|1|1|A|521
4V91|1|1|A|522
4V91|1|1|A|523
4V91|1|1|U|524
4V91|1|1|C|525
*
4V91|1|1|G|567
4V91|1|1|G|568
4V91|1|1|A|569
4V91|1|1|A|570
4V91|1|1|U|571
4V91|1|1|A|572
4V91|1|1|C|573

Current chains

Chain 1
25S RRNA

Nearby chains

Chain C
UL4
Chain F
UL30
Chain M
EL14
Chain S
EL20

Coloring options:

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