Motif IL_17748.1 Version IL_17748.1 of this group appears in releases 2.0 to 2.0

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6		7	break		8		9		10		11		12		13		14	1-14	2-13	3-11	3-12	4-11	5-10	6-9	7-8
1	IL_3NDB_008	3NDB	0.0000	0	M	SRP RNA	G	200	C	201	C	202	A	203	G	204	G	205	C	206	*	G	215	A	216	G	217	C	218	A	219	A	220	C	221	cWW	cWW	ntWH	ntSH	tHW	tHS	cWW	cWW
2	IL_4V91_023	4V91	0.7060	2	1	LSU rRNA	G	517	G	518	A	521	A	522	A	523	U	524	C	525	*	G	567	G	568	A	569	A	570	U	571	A	572	C	573	cWW			tHW	tHW	tHW	ncBW	ncWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GCCAGGC*GAGCAAC	1
GGAUAAAUC*GGAAUAC	1

Non-Watson-Crick part of the motif

Sequence	Counts
CCAGG*AGCAA	1
GAUAAAU*GAAUA	1

Release history

Release	2.0
Date	2017-04-24
Status	New id, no parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-cWW-tHW-tWH-tHW-tHW-bif-cWW
Heat map statistics: Min 0.71 | Avg 0.35 | Max 0.71

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