IL_4V91_084

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

4V91|1|1|U|1931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_95863.1

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

15

Unit IDs

4V91|1|1|C|1918
4V91|1|1|G|1919
4V91|1|1|U|1920
4V91|1|1|A|1921
4V91|1|1|A|1922
4V91|1|1|C|1923
*
4V91|1|1|G|1928
4V91|1|1|G|1929
4V91|1|1|A|1930
4V91|1|1|U|1931
4V91|1|1|A|1932
4V91|1|1|A|1933
4V91|1|1|G|1934

Current chains

Chain 1

25S RRNA

Nearby chains

Chain R

EL19

Chain n

EL41

Chain p

EL43