3D structure

PDB id
4V91 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
AUGCGUAGGAUAG*CCUU
Length
17 nucleotides
Bulged bases
4V91|1|1|G|2458
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_35049.1
Basepair signature
cWW-cSW-L-R-cWW
Number of instances in this motif group
6

Unit IDs

4V91|1|1|A|2450
4V91|1|1|U|2451
4V91|1|1|G|2452
4V91|1|1|C|2453
4V91|1|1|G|2454
4V91|1|1|U|2455
4V91|1|1|A|2456
4V91|1|1|G|2457
4V91|1|1|G|2458
4V91|1|1|A|2459
4V91|1|1|U|2460
4V91|1|1|A|2461
4V91|1|1|G|2462
*
4V91|1|1|C|2493
4V91|1|1|C|2494
4V91|1|1|U|2495
4V91|1|1|U|2496

Current chains

Chain 1
25S RRNA

Nearby chains

Chain t
UL1

Coloring options:

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