IL_4V91_105

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

4V91|1|1|A|2484

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92628.1

Basepair signature

cWW-tSH-tWH-tWH-R-R-R-R-R-tSS-cWW

Number of instances in this motif group

5

Unit IDs

4V91|1|1|G|2466
4V91|1|1|G|2467
4V91|1|1|A|2468
4V91|1|1|G|2469
*
4V91|1|1|C|2476
4V91|1|1|G|2477
4V91|1|1|C|2478
4V91|1|1|C|2479
4V91|1|1|G|2480
4V91|1|1|G|2481
4V91|1|1|U|2482
4V91|1|1|G|2483
4V91|1|1|A|2484
4V91|1|1|A|2485
4V91|1|1|A|2486
4V91|1|1|U|2487
4V91|1|1|A|2488
4V91|1|1|C|2489

Current chains

Chain 1

25S RRNA

Nearby chains

Chain t

UL1