IL_4V91_126

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUUAGUAC*GGAACAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86124.1

Basepair signature

cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

32

Unit IDs

4V91|1|1|C|3018
4V91|1|1|U|3019
4V91|1|1|U|3020
4V91|1|1|A|3021
4V91|1|1|G|3022
4V91|1|1|U|3023
4V91|1|1|A|3024
4V91|1|1|C|3025
*
4V91|1|1|G|3030
4V91|1|1|G|3031
4V91|1|1|A|3032
4V91|1|1|A|3033
4V91|1|1|C|3034
4V91|1|1|A|3035
4V91|1|1|G|3036

Current chains

Chain 1

25S RRNA

Nearby chains

Chain B

UL3

Chain H

UL6

Chain V

UL14

Chain m

EL40