IL_4V91_169
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAAUGUAG*UAUUAUAGC
- Length
- 17 nucleotides
- Bulged bases
- 4V91|1|1|U|534, 4V91|1|1|U|558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V91_169 not in the Motif Atlas
- Homologous match to IL_8CRE_022
- Geometric discrepancy: 0.1346
- The information below is about IL_8CRE_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_43858.1
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V91|1|1|G|531
4V91|1|1|A|532
4V91|1|1|A|533
4V91|1|1|U|534
4V91|1|1|G|535
4V91|1|1|U|536
4V91|1|1|A|537
4V91|1|1|G|538
*
4V91|1|1|U|553
4V91|1|1|A|554
4V91|1|1|U|555
4V91|1|1|U|556
4V91|1|1|A|557
4V91|1|1|U|558
4V91|1|1|A|559
4V91|1|1|G|560
4V91|1|1|C|561
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain M
- EL14
- Chain S
- EL20
Coloring options: