IL_4V97_354

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CGGG*UCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V97_354 not in the Motif Atlas

Geometric match to IL_5TBW_100

Geometric discrepancy: 0.2285

The information below is about IL_5TBW_100

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67085.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

55

Unit IDs

4V97|1|AA|C|67
4V97|1|AA|G|68
4V97|1|AA|G|69
4V97|1|AA|G|70
*
4V97|1|AA|U|99
4V97|1|AA|C|100
4V97|1|AA|A|101
4V97|1|AA|G|102

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AT

30S ribosomal protein S20