IL_4V9A_050
3D structure
- PDB id
- 4V9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the 70S ribosome with tetracycline.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 4V9A|1|AA|U|1257, 4V9A|1|AA|A|1280, 4V9A|1|AA|U|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9A_050 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.1966
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_08849.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V9A|1|AA|G|1255
4V9A|1|AA|A|1256
4V9A|1|AA|U|1257
4V9A|1|AA|G|1258
*
4V9A|1|AA|C|1277
4V9A|1|AA|U|1278
4V9A|1|AA|A|1279
4V9A|1|AA|A|1280
4V9A|1|AA|U|1281
4V9A|1|AA|C|1282
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AF
- 30S RIBOSOMAL PROTEIN S3
- Chain AM
- 30S RIBOSOMAL PROTEIN S10
- Chain AQ
- 30S RIBOSOMAL PROTEIN S14
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