IL_4V9C_158

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

4V9C|1|BA|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9C_158 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.1533

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4V9C|1|BA|C|1437
4V9C|1|BA|U|1438
4V9C|1|BA|A|1439
4V9C|1|BA|U|1440
*
4V9C|1|BA|A|1551
4V9C|1|BA|A|1552
4V9C|1|BA|A|1553
4V9C|1|BA|U|1554
4V9C|1|BA|G|1555

Current chains

Chain BA

23S ribosomal RNA

Nearby chains