IL_4V9C_268

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUCG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9C_268 not in the Motif Atlas

Geometric match to IL_8C3A_009

Geometric discrepancy: 0.3983

The information below is about IL_8C3A_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_90170.1

Basepair signature

cWW-L-R-L-cWW-cWW

Number of instances in this motif group

5

Unit IDs

4V9C|1|CA|C|658
4V9C|1|CA|U|659
4V9C|1|CA|C|660
4V9C|1|CA|G|661
*
4V9C|1|CA|C|744
4V9C|1|CA|G|745
4V9C|1|CA|A|746
4V9C|1|CA|A|747
4V9C|1|CA|G|748

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CO

30S ribosomal protein S15