IL_4V9I_199
3D structure
- PDB id
- 4V9I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAACC*GACUGAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9I_199 not in the Motif Atlas
- Homologous match to IL_4LFB_019
- Geometric discrepancy: 0.0955
- The information below is about IL_4LFB_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31561.1
- Basepair signature
- cWW-L-R-tWH-tWH-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V9I|1|CA|G|445
4V9I|1|CA|A|446
4V9I|1|CA|A|447
4V9I|1|CA|A|448
4V9I|1|CA|C|449
4V9I|1|CA|C|450
*
4V9I|1|CA|G|462
4V9I|1|CA|A|463
4V9I|1|CA|C|464
4V9I|1|CA|U|465
4V9I|1|CA|G|466
4V9I|1|CA|A|467
4V9I|1|CA|C|468
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CP
- 30S Ribosomal protein S16
Coloring options: