IL_4V9I_230
3D structure
- PDB id
- 4V9I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UACAAAG*CAAAAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9I_230 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.1081
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V9I|1|CA|U|1229
4V9I|1|CA|A|1230
4V9I|1|CA|C|1231
4V9I|1|CA|A|1232
4V9I|1|CA|A|1233
4V9I|1|CA|A|1234
4V9I|1|CA|G|1235
*
4V9I|1|CA|C|1266
4V9I|1|CA|A|1267
4V9I|1|CA|A|1268
4V9I|1|CA|A|1269
4V9I|1|CA|A|1270
4V9I|1|CA|A|1271
4V9I|1|CA|G|1272
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CG
- 30S Ribosomal protein S7
- Chain CI
- 30S Ribosomal protein S9
- Chain CJ
- 30S Ribosomal protein S10
- Chain CN
- 30S Ribosomal protein S14
- Chain CU
- 30S Ribosomal protein THX
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