IL_4V9O_730
3D structure
- PDB id
- 4V9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GGCG*CGUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9O_730 not in the Motif Atlas
- Geometric match to IL_1JID_002
- Geometric discrepancy: 0.352
- The information below is about IL_1JID_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
4V9O|1|HA|G|1241
4V9O|1|HA|G|1242
4V9O|1|HA|C|1243
4V9O|1|HA|G|1244
*
4V9O|1|HA|C|1293
4V9O|1|HA|G|1294
4V9O|1|HA|U|1295
4V9O|1|HA|C|1296
Current chains
- Chain HA
- 16S rRNA
Nearby chains
- Chain CA
- Large subunit ribosomal RNA; LSU rRNA
- Chain CH
- 50S ribosomal protein L9
- Chain HG
- 30S ribosomal protein S7
- Chain HI
- 30S ribosomal protein S9
- Chain HM
- 30S ribosomal protein S13
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