IL_4V9P_154
3D structure
- PDB id
- 4V9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CAGGU*AUCUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9P_154 not in the Motif Atlas
- Geometric match to IL_8VMA_004
- Geometric discrepancy: 0.3278
- The information below is about IL_8VMA_004
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
4V9P|1|BA|C|680
4V9P|1|BA|A|681
4V9P|1|BA|G|682
4V9P|1|BA|G|683
4V9P|1|BA|U|684
*
4V9P|1|BA|A|706
4V9P|1|BA|U|707
4V9P|1|BA|C|708
4V9P|1|BA|U|709
4V9P|1|BA|G|710
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain AC
- 50S ribosomal protein L2
- Chain BF
- 30S ribosomal protein S6
- Chain BK
- 30S ribosomal protein S11
- Chain BR
- 30S ribosomal protein S18
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