IL_4V9P_268
3D structure
- PDB id
- 4V9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAGC*GUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9P_268 not in the Motif Atlas
- Geometric match to IL_402D_001
- Geometric discrepancy: 0.3639
- The information below is about IL_402D_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
4V9P|1|CA|G|2100
4V9P|1|CA|A|2101
4V9P|1|CA|G|2102
4V9P|1|CA|C|2103
*
4V9P|1|CA|G|2186
4V9P|1|CA|U|2187
4V9P|1|CA|U|2188
4V9P|1|CA|U|2189
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain CH
- 50S ribosomal protein L9
- Chain HA
- Small subunit ribosomal RNA; SSU rRNA
- Chain HG
- 30S ribosomal protein S7
- Chain HM
- 30S ribosomal protein S13
Coloring options: