IL_4W21_103
3D structure
- PDB id
- 4W21 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGGAAUG*CGAGAGA
- Length
- 14 nucleotides
- Bulged bases
- 4W21|1|5|U|2661, 4W21|1|5|A|2674
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37053.4
- Basepair signature
- cWW-tSH-tSH-tHS-tSS-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
4W21|1|5|U|2656
4W21|1|5|G|2657
4W21|1|5|G|2658
4W21|1|5|A|2659
4W21|1|5|A|2660
4W21|1|5|U|2661
4W21|1|5|G|2662
*
4W21|1|5|C|2672
4W21|1|5|G|2673
4W21|1|5|A|2674
4W21|1|5|G|2675
4W21|1|5|A|2676
4W21|1|5|G|2677
4W21|1|5|A|2678
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: