IL_4W21_160
3D structure
- PDB id
- 4W21 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAACG*CUCGC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_03783.1
- Basepair signature
- cWW-L-R-R-R-R-L-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4W21|1|5|G|4891
4W21|1|5|A|4892
4W21|1|5|A|4893
4W21|1|5|A|4894
4W21|1|5|C|4895
4W21|1|5|G|4896
*
4W21|1|5|C|4924
4W21|1|5|U|4925
4W21|1|5|C|4926
4W21|1|5|G|4927
4W21|1|5|C|4928
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: